Index _ | A | C | D | E | F | G | J | L | M | O | P | R | S | T | U | W _ __init__() (openprotein.api.align.AlignAPI method) (openprotein.api.align.MSAFuture method) (openprotein.api.align.PromptFuture method) (openprotein.api.data.AssayDataset method) (openprotein.api.data.DataAPI method) (openprotein.api.design.DesignAPI method) (openprotein.api.design.DesignFuture method) (openprotein.api.embedding.EmbeddingAPI method) (openprotein.api.embedding.EmbeddingResultFuture method) (openprotein.api.embedding.ESMModel method) (openprotein.api.embedding.OpenProteinModel method) (openprotein.api.embedding.PoETModel method) (openprotein.api.embedding.SVDModel method) (openprotein.api.fold.AlphaFold2Model method) (openprotein.api.fold.ESMFoldModel method) (openprotein.api.fold.FoldAPI method) (openprotein.api.fold.FoldResultFuture method) (openprotein.api.poet.PoetGenerateFuture method) (openprotein.api.poet.PoetScoreFuture method) (openprotein.api.poet.PoetSingleSiteFuture method) (openprotein.api.predict.PredictFuture method) (openprotein.api.train.TrainFuture method) (openprotein.api.train.TrainingAPI method) (openprotein.APISession method) A af2 (openprotein.api.fold.FoldAPI property) align (openprotein.OpenProtein property) AlignAPI (class in openprotein.api.align) alphafold2 (openprotein.api.fold.FoldAPI attribute) AlphaFold2Model (class in openprotein.api.fold) APISession (class in openprotein) AssayDataset (class in openprotein.api.data) attn() (openprotein.api.embedding.ESMModel method) (openprotein.api.embedding.OpenProteinModel method) (openprotein.api.embedding.PoETModel method) C create() (openprotein.api.data.DataAPI method) create_design_job() (openprotein.api.design.DesignAPI method) create_msa() (openprotein.api.align.AlignAPI method) create_training_job() (openprotein.api.train.TrainingAPI method) D data (openprotein.OpenProtein property) DataAPI (class in openprotein.api.data) delete() (openprotein.api.embedding.SVDModel method) design (openprotein.OpenProtein property) DesignAPI (class in openprotein.api.design) DesignFuture (class in openprotein.api.design) E embed() (openprotein.api.embedding.ESMModel method) (openprotein.api.embedding.OpenProteinModel method) (openprotein.api.embedding.PoETModel method) (openprotein.api.embedding.SVDModel method) embedding (openprotein.OpenProtein property) EmbeddingAPI (class in openprotein.api.embedding) EmbeddingResultFuture (class in openprotein.api.embedding) esm1b_t33_650M_UR50S (openprotein.api.embedding.EmbeddingAPI attribute) esm1v_t33_650M_UR90S_1 (openprotein.api.embedding.EmbeddingAPI attribute) esm1v_t33_650M_UR90S_2 (openprotein.api.embedding.EmbeddingAPI attribute) esm1v_t33_650M_UR90S_3 (openprotein.api.embedding.EmbeddingAPI attribute) esm1v_t33_650M_UR90S_4 (openprotein.api.embedding.EmbeddingAPI attribute) esm1v_t33_650M_UR90S_5 (openprotein.api.embedding.EmbeddingAPI attribute) esm2_t12_35M_UR50D (openprotein.api.embedding.EmbeddingAPI attribute) esm2_t30_150M_UR50D (openprotein.api.embedding.EmbeddingAPI attribute) esm2_t33_650M_UR50D (openprotein.api.embedding.EmbeddingAPI attribute) esm2_t36_3B_UR50D (openprotein.api.embedding.EmbeddingAPI attribute) esm2_t6_8M_UR50D (openprotein.api.embedding.EmbeddingAPI attribute) esmfold (openprotein.api.fold.FoldAPI attribute) ESMFoldModel (class in openprotein.api.fold) ESMModel (class in openprotein.api.embedding) F fit_svd() (openprotein.api.embedding.ESMModel method) (openprotein.api.embedding.OpenProteinModel method) (openprotein.api.embedding.PoETModel method) fold (openprotein.OpenProtein property) fold() (openprotein.api.fold.AlphaFold2Model method) (openprotein.api.fold.ESMFoldModel method) FoldAPI (class in openprotein.api.fold) FoldResultFuture (class in openprotein.api.fold) G generate() (openprotein.api.embedding.PoETModel method) get() (openprotein.api.align.MSAFuture method) (openprotein.api.align.PromptFuture method) (openprotein.api.data.DataAPI method) (openprotein.api.design.DesignFuture method) (openprotein.api.poet.PoetScoreFuture method), [1] (openprotein.api.poet.PoetSingleSiteFuture method), [1] (openprotein.api.predict.PredictFuture method) get_design_results() (openprotein.api.design.DesignAPI method) get_embeddings() (openprotein.api.embedding.SVDModel method) get_first() (openprotein.api.data.AssayDataset method) get_input() (openprotein.api.align.MSAFuture method) (openprotein.api.align.PromptFuture method) (openprotein.api.poet.PoetGenerateFuture method) (openprotein.api.poet.PoetScoreFuture method) (openprotein.api.poet.PoetSingleSiteFuture method) get_inputs() (openprotein.api.embedding.SVDModel method) get_item() (openprotein.api.embedding.EmbeddingResultFuture method) (openprotein.api.fold.FoldResultFuture method) get_job() (openprotein.api.embedding.SVDModel method) get_job_type() (openprotein.api.align.MSAFuture class method) (openprotein.api.align.PromptFuture class method) (openprotein.api.embedding.EmbeddingResultFuture class method) (openprotein.api.embedding.SVDModel class method) (openprotein.api.fold.FoldResultFuture class method) (openprotein.api.poet.PoetGenerateFuture class method) (openprotein.api.poet.PoetScoreFuture class method) (openprotein.api.poet.PoetSingleSiteFuture class method) get_metadata() (openprotein.api.embedding.ESMModel method) (openprotein.api.embedding.OpenProteinModel method) (openprotein.api.embedding.PoETModel method) (openprotein.api.fold.AlphaFold2Model method) (openprotein.api.fold.ESMFoldModel method) get_model() (openprotein.api.embedding.EmbeddingAPI method) (openprotein.api.embedding.OpenProteinModel class method) (openprotein.api.embedding.SVDModel method) (openprotein.api.fold.ESMFoldModel class method) (openprotein.api.fold.FoldAPI method) get_msa() (openprotein.api.align.AlignAPI method) (openprotein.api.align.MSAFuture method) (openprotein.api.align.PromptFuture method) (openprotein.api.poet.PoetGenerateFuture method) (openprotein.api.poet.PoetScoreFuture method) (openprotein.api.poet.PoetSingleSiteFuture method) get_prompt() (openprotein.api.align.AlignAPI method) (openprotein.api.align.MSAFuture method) (openprotein.api.align.PromptFuture method) (openprotein.api.poet.PoetGenerateFuture method) (openprotein.api.poet.PoetScoreFuture method) (openprotein.api.poet.PoetSingleSiteFuture method) get_results() (openprotein.api.fold.FoldAPI method) get_seed() (openprotein.api.align.AlignAPI method) (openprotein.api.align.MSAFuture method) (openprotein.api.align.PromptFuture method) (openprotein.api.poet.PoetGenerateFuture method) (openprotein.api.poet.PoetScoreFuture method) (openprotein.api.poet.PoetSingleSiteFuture method) get_slice() (openprotein.api.data.AssayDataset method) get_svd() (openprotein.api.embedding.EmbeddingAPI method) get_training_results() (openprotein.api.train.TrainingAPI method) J job (openprotein.api.align.MSAFuture attribute) (openprotein.api.align.PromptFuture attribute) (openprotein.api.poet.PoetGenerateFuture attribute) (openprotein.api.poet.PoetScoreFuture attribute) (openprotein.api.poet.PoetSingleSiteFuture attribute) job_type (openprotein.api.fold.FoldResultFuture attribute) jobs (openprotein.OpenProtein property) L list() (openprotein.api.data.DataAPI method) list_models() (openprotein.api.data.AssayDataset method) (openprotein.api.embedding.EmbeddingAPI method) (openprotein.api.fold.FoldAPI method) list_svd() (openprotein.api.embedding.EmbeddingAPI method) load_assay() (openprotein.api.data.DataAPI method) login() (openprotein.APISession method) logits() (openprotein.api.embedding.ESMModel method) (openprotein.api.embedding.OpenProteinModel method) (openprotein.api.embedding.PoETModel method) M metadata (openprotein.api.embedding.OpenProteinModel property) (openprotein.api.fold.ESMFoldModel property) Methods (openprotein.api.poet.PoetGenerateFuture attribute) model_id (openprotein.api.embedding.OpenProteinModel attribute) (openprotein.api.fold.ESMFoldModel attribute) MSAFuture (class in openprotein.api.align) O OpenProtein (class in openprotein) OpenProteinModel (class in openprotein.api.embedding) P page_size (openprotein.api.align.MSAFuture attribute) (openprotein.api.align.PromptFuture attribute) (openprotein.api.poet.PoetScoreFuture attribute) (openprotein.api.poet.PoetSingleSiteFuture attribute) poet (openprotein.api.embedding.EmbeddingAPI attribute) PoetGenerateFuture (class in openprotein.api.poet) PoETModel (class in openprotein.api.embedding) PoetScoreFuture (class in openprotein.api.poet) PoetSingleSiteFuture (class in openprotein.api.poet) post() (openprotein.APISession method) predict() (openprotein.api.train.TrainFuture method) predict_single_site() (openprotein.api.train.TrainFuture method) PredictFuture (class in openprotein.api.predict) PromptFuture (class in openprotein.api.align) prot_seq (openprotein.api.embedding.EmbeddingAPI attribute) R refresh() (openprotein.api.align.MSAFuture method) (openprotein.api.align.PromptFuture method) (openprotein.api.embedding.EmbeddingResultFuture method) (openprotein.api.embedding.SVDModel method) (openprotein.api.fold.FoldResultFuture method) (openprotein.api.poet.PoetGenerateFuture method) (openprotein.api.poet.PoetScoreFuture method) (openprotein.api.poet.PoetSingleSiteFuture method) rotaprot_large_uniref50w (openprotein.api.embedding.EmbeddingAPI attribute) rotaprot_large_uniref90_ft (openprotein.api.embedding.EmbeddingAPI attribute) S sample_prompt() (openprotein.api.align.MSAFuture method) (openprotein.api.align.PromptFuture method) score() (openprotein.api.embedding.PoETModel method) session (openprotein.api.align.MSAFuture attribute) (openprotein.api.align.PromptFuture attribute) (openprotein.api.poet.PoetGenerateFuture attribute) (openprotein.api.poet.PoetScoreFuture attribute) (openprotein.api.poet.PoetSingleSiteFuture attribute) single_site() (openprotein.api.embedding.PoETModel method) stream() (openprotein.api.poet.PoetGenerateFuture method) SVDModel (class in openprotein.api.embedding) T train (openprotein.OpenProtein property) TrainFuture (class in openprotein.api.train) TrainingAPI (class in openprotein.api.train) U update() (openprotein.api.data.AssayDataset method) upload_msa() (openprotein.api.align.AlignAPI method) upload_prompt() (openprotein.api.align.AlignAPI method) W wait() (openprotein.api.align.MSAFuture method) (openprotein.api.align.PromptFuture method) (openprotein.api.embedding.EmbeddingResultFuture method) (openprotein.api.embedding.SVDModel method) (openprotein.api.fold.FoldResultFuture method) (openprotein.api.poet.PoetGenerateFuture method) (openprotein.api.poet.PoetScoreFuture method) (openprotein.api.poet.PoetSingleSiteFuture method) wait_until_done() (openprotein.api.align.MSAFuture method) (openprotein.api.align.PromptFuture method) (openprotein.api.embedding.EmbeddingResultFuture method) (openprotein.api.embedding.SVDModel method) (openprotein.api.fold.FoldResultFuture method) (openprotein.api.poet.PoetGenerateFuture method) (openprotein.api.poet.PoetScoreFuture method) (openprotein.api.poet.PoetSingleSiteFuture method)